(Senior) Translational Scientist

Tempus · Chicago, IL

Company

Tempus

Location

Chicago, IL

Type

Full Time

Job Description

Passionate about precision medicine and advancing the healthcare industry?

Recent advancements in underlying technology have finally made it possible for AI to impact clinical care in a meaningful way. Tempus' proprietary platform connects an entire ecosystem of real-world evidence to deliver real-time, actionable insights to physicians, providing critical information about the right treatments for the right patients, at the right time.

We are a precision medicine company that utilizes real-world data to develop innovative healthcare solutions focusing on oncology. We seek a highly motivated and skilled Translational Research Engineer / Computational Biologist with expertise in the R programming language to join our Translational Research team. The successful candidate will have experience in building R packages, writing parameterized Rmarkdown reports, and managing complexity with Python dependencies.

The ideal candidate will be expected to work in a fast-paced environment, writing good quality, well-documented code on a daily basis in service of the Translational research team. The majority of the role will be dedicated to building R packages for serval oncology analysis applications that work on a unique stack - Google Cloud, Docker, Kubernetes, R, Python, SQL (Google Bigquery), and Unix. 

Responsibilities:

  • Develop and maintain R packages for data analysis and statistical modeling, focusing on oncology applications.
  • Create customizable and fully reproducible reports in Rmarkdown for real-world data analysis in oncology.
  • Collaborate with researchers to develop data processing pipelines and visualizations for oncology applications.
  • Manage dependencies with Python and integrate with R code for oncology applications.
  • Optimize and scale data analyses for oncology applications using cloud-based systems, specifically Google Cloud.
  • Utilize containerization tools such as Docker to deploy data processing workflows for oncology applications efficiently.
  • Develop and maintain data processing workflows using Python for oncology applications.

Qualifications:

  • Ph.D. in Bioinformatics or Computational Biology or a relevant scientific field. Post-doctoral experience is valuable. 
  • Expertise in R programming and statistical modeling.
  • Experience building R packages and writing parameterized Rmarkdown reports for real-world data analysis in oncology.
  • Experience with Python, working with R - Python interaction (reticulate R package), and ability to manage dependencies with Python.
  • Proficiency in cloud-based systems, specifically Google Cloud, ideally for oncology applications.
  • Experience with containerization tools such as Docker.
  • Strong problem-solving skills and ability to manage complexity.
  • Experience building R packages in Bioconductor or CRAN for oncology applications is a huge bonus.
  • Demonstrated experience in using not just base R but also tidyverse for real-world data analysis.
  • Experience in applying machine learning to biology is a plus.
  • Good understanding of SQL and demonstrated use of R packages interfacing with SQL.
  • You enjoy the biotech working culture with a great collaborative spirit and are a strong team player in a fast-paced startup environment. 

This is a full-time position with a competitive salary and benefits package. If you are a research engineer or computational biologist passionate about using data and technology to drive scientific discovery in precision medicine, specifically in oncology, we encourage you to apply for this exciting opportunity.


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We are an equal opportunity employer. We do not discriminate on the basis of race, religion, color, national origin, gender, sexual orientation, age, marital status, veteran status, or disability status.

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Date Posted

03/09/2023

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